ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1sqfA2 - ECOD Domain | ECOD

ECOD/Domains/e1sqfA2

e1sqfA2

UID: 001131167

PDB

Range: A:232-429
PDB: 1SQF chain A(all domains)
UniProt: P36929 (all domains)
Gene: rsmB

Molecule: SUN protein

3D Structure

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Related Domains

Browse other domains in Methyltr_RsmB-F →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltr_RsmB-F(2003.1.5.6)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01189Methyltr_RsmB-F

16S rRNA methyltransferase RsmB/F

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1SQF RCSB PDB: 1SQF PDBe: 1SQF UniProt: P36929

Downloads

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