ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xpmB1 - ECOD Domain | ECOD

ECOD/Domains/e1xpmB1

e1xpmB1

UID: 000113294

PDB

Range: B:2-167
PDB: 1XPM chain B(all domains)
UniProt: Q79ZY6 (all domains)

Molecule: 3-hydroxy-3-methylglutaryl CoA synthase

3D Structure

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Related Domains

Browse other domains in HMG_CoA_synt_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiolase-like(7581)

HH-groupThiolase-like(7581.1)

TT-groupThiolase-like(7581.1.1)

FFamilyHMG_CoA_synt_N(7581.1.1.5)

Ligands

in contact, ≤ 4 Å

Acetoacetyl-CoACAA
drugDrugBank DB03059
(S)-Hmg-CoaHMG
drugDrugBank DB03169

+ 1 additive (Sulfate ion)

Pfam Families

PF01154HMG_CoA_synt_N

Hydroxymethylglutaryl-coenzyme A synthase N terminal

ClanCL0046Thiolase

External Links

ECOD PDB View: 1XPM RCSB PDB: 1XPM PDBe: 1XPM UniProt: Q79ZY6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.