ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3hdjA1 - ECOD Domain | ECOD

ECOD/Domains/e3hdjA1

e3hdjA1

UID: 001137355

RepresentativePDB

Range: A:102-285
PDB: 3HDJ chain A(all domains)
UniProt: Q7VSP8 (all domains)
Gene: BP0354

Molecule: Probable ornithine cyclodeaminase

3D Structure

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Related Domains

Browse other domains in OCD_Mu_crystall →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyOCD_Mu_crystall(2003.1.1.29)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02423OCD_Mu_crystall

Ornithine cyclodeaminase/mu-crystallin family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3HDJ RCSB PDB: 3HDJ PDBe: 3HDJ UniProt: Q7VSP8

Downloads

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