ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xdpA4 - ECOD Domain | ECOD

ECOD/Domains/e1xdpA4

e1xdpA4

UID: 000011380

RepresentativePDB

Range: A:502-688
PDB: 1XDP chain A(all domains)
UniProt: P0A7B1 (all domains)
Gene: ppk

Molecule: Polyphosphate kinase

3D Structure

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Related Domains

Browse other domains in PP_kinase_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupPhospholipase D/nuclease(300)

HH-groupPhospholipase D/nuclease(300.1)

TT-groupPhospholipase D/nuclease(300.1.1)

FFamilyPP_kinase_C(300.1.1.7)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13090PP_kinase_C

Polyphosphate kinase C-terminal domain 2

ClanCL0479PLD

External Links

ECOD PDB View: 1XDP RCSB PDB: 1XDP PDBe: 1XDP UniProt: P0A7B1

Downloads

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