ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3nwdB2 - ECOD Domain | ECOD

ECOD/Domains/e3nwdB2

e3nwdB2

UID: 001138643

PDB

Range: B:139-152,B:365-484
PDB: 3NWD chain B(all domains)
UniProt: P06437 (all domains)
Gene: gB

Molecule: Envelope glycoprotein B

3D Structure

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Related Domains

Browse other domains in Glycoprot_B_PH2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPH domain-like(220)

HH-groupsecond barrel domain in viral glycoproteins(220.4)

TT-groupsecond barrel domain in viral glycoproteins(220.4.1)

FFamilyGlycoprot_B_PH2(220.4.1.3)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17417Glycoprot_B_PH2

Herpesvirus Glycoprotein B PH-like domain

ClanCL0266PH

External Links

ECOD PDB View: 3NWD RCSB PDB: 3NWD PDBe: 3NWD UniProt: P06437

Downloads

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