ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qwvA1 - ECOD Domain | ECOD

ECOD/Domains/e3qwvA1

e3qwvA1

UID: 001138760

RepresentativePDB

Range: A:3-274
PDB: 3QWV chain A(all domains)
UniProt: Q8R5A0 (all domains)
Gene: Smyd2

Molecule: SET and MYND domain-containing protein 2

3D Structure

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Related Domains

Browse other domains in SET, zf-MYND →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilySET, zf-MYND(70.3.1.11)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SET domain

ClanCL0489SAF

PF01753zf-MYND

MYND finger

ClanCL0175TRASH

External Links

ECOD PDB View: 3QWV RCSB PDB: 3QWV PDBe: 3QWV UniProt: Q8R5A0

Downloads

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