ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ikvA2 - ECOD Domain | ECOD

ECOD/Domains/e4ikvA2

e4ikvA2

UID: 001139702

PDB

Range: A:255-493
PDB: 4IKV chain A(all domains)
UniProt: Q5KYD1 (all domains)
Gene: GK2020

Molecule: Di-tripeptide ABC transporter (Permease)

3D Structure

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Related Domains

Browse other domains in PTR2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupMajor facilitator superfamily (MFS) general substrate transporter(5050)

HH-groupMajor facilitator superfamily (MFS) general substrate transporter(5050.1)

TT-groupMajor facilitator superfamily (MFS) general substrate transporter(5050.1.1)

FFamilyPTR2(5050.1.1.2)

Ligands

in contact, ≤ 4 Å

Oleic acidOLA
(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLB

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycolPG4

Pfam Families

POT family

ClanCL0015MFS

External Links

ECOD PDB View: 4IKV RCSB PDB: 4IKV PDBe: 4IKV UniProt: Q5KYD1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.