ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4la3B1 - ECOD Domain | ECOD

ECOD/Domains/e4la3B1

e4la3B1

UID: 001140355

PDB

Range: B:2-190
PDB: 4LA3 chain B(all domains)
UniProt: D0CY60 (all domains)
Gene: dddQ

Molecule: Dimethylsulphoniopropionate (DMSP) lyase DddQ

3D Structure

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Related Domains

Browse other domains in DMSP_lyase →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyDMSP_lyase(10.12.1.58)

Ligands

in contact, ≤ 4 Å

3-(dimethyl-lambda~4~-sulfanyl)propanoic acidDQY
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16867DMSP_lyase

Dimethlysulfonioproprionate lyase

ClanCL0029Cupin

External Links

ECOD PDB View: 4LA3 RCSB PDB: 4LA3 PDBe: 4LA3 UniProt: D0CY60

Downloads

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