ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1on3A2 - ECOD Domain | ECOD

ECOD/Domains/e1on3A2

e1on3A2

UID: 000011405

RepresentativePDB

Range: A:261-524
PDB: 1ON3 chain A(all domains)
UniProt: Q8GBW6 (all domains)

Molecule: Methylmalonyl-CoA carboxyltransferase 12S subunit

3D Structure

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Related Domains

Browse other domains in Carboxyl_trans →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupClpP/crotonase(2486)

HH-groupClpP/crotonase(2486.1)

TT-groupClpP/crotonase(2486.1.1)

FFamilyCarboxyl_trans(2486.1.1.3)

Ligands

in contact, ≤ 4 Å

(R)-methylmalonyl-CoAMCA
drugDrugBank DB04045
Methylmalonic AcidDXX
drugDrugBank DB04183within 5 Å only

Pfam Families

PF01039Carboxyl_trans

Carboxyl transferase domain

ClanCL0127ClpP_crotonase

External Links

ECOD PDB View: 1ON3 RCSB PDB: 1ON3 PDBe: 1ON3 UniProt: Q8GBW6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Cadmium ionCD

metal

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.