ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kieA1 - ECOD Domain | ECOD

ECOD/Domains/e4kieA1

e4kieA1

UID: 001140806

PDB

Range: A:98-358
PDB: 4KIE chain A(all domains)
UniProt: P21514 (all domains)
Gene: pdeL

Molecule: Cyclic di-GMP phosphodiesterase YahA

3D Structure

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Related Domains

Browse other domains in EAL →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupEAL domain(2002.5)

TT-groupEAL domain(2002.5.1)

FFamilyEAL(2002.5.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Triethylene glycol)

Triethylene glycolPGE
DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

EAL domain

ClanCL0276Nucleot_cyclase

External Links

ECOD PDB View: 4KIE RCSB PDB: 4KIE PDBe: 4KIE UniProt: P21514

Downloads

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