ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zk4B1 - ECOD Domain | ECOD

ECOD/Domains/e3zk4B1

e3zk4B1

UID: 001141264

RepresentativePDB

Range: B:259-590
PDB: 3ZK4 chain B(all domains)
UniProt: Q8VX11 (all domains)
Gene: ppd1

Molecule: DIPHOSPHONUCLEOTIDE PHOSPHATASE 1

3D Structure

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Related Domains

Browse other domains in Metallophos,Metallophos_C →

Classification

AArchitecturea+b four layers(a.13)

XX-groupCarbon-nitrogen hydrolase-like(246)

HH-groupMetallo-dependent phosphatases(246.2)

TT-groupMetallo-dependent phosphatases(246.2.1)

FFamilyMetallophos,Metallophos_C(246.2.1.3)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
FE (III) IONFE
metal
MANGANESE (II) ION

Pfam Families

PF00149Metallophos

Calcineurin-like phosphoesterase

ClanCL0163Calcineurin

PF14008Metallophos_C

Iron/zinc purple acid phosphatase-like protein C

External Links

ECOD PDB View: 3ZK4 RCSB PDB: 3ZK4 PDBe: 3ZK4 UniProt: Q8VX11

Downloads

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metal

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.