ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1az0B1 - ECOD Domain | ECOD

ECOD/Domains/e1az0B1

e1az0B1

UID: 000114175

PDB

Range: B:2-245
PDB: 1AZ0 chain B(all domains)
UniProt: P04390 (all domains)
Gene: ecoRVR

Molecule: PROTEIN (TYPE II RESTRICTION ENZYME ECORV)

3D Structure

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Related Domains

Browse other domains in Endonuc-EcoRV →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyEndonuc-EcoRV(2008.1.1.43)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09233Endonuc-EcoRV

Restriction endonuclease EcoRV

ClanCL0236PDDEXK

External Links

ECOD PDB View: 1AZ0 RCSB PDB: 1AZ0 PDBe: 1AZ0 UniProt: P04390

Downloads

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