ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ojzA1 - ECOD Domain | ECOD

ECOD/Domains/e4ojzA1

e4ojzA1

UID: 001142020

RepresentativePDB

Range: A:30-370
PDB: 4OJZ chain A(all domains)
UniProt: Q21FJ0 (all domains)
Gene: alg17C

Molecule: Putative alginate lyase

3D Structure

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Related Domains

Browse other domains in Alginate_lyase →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyAlginate_lyase(109.2.1.17)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metalwithin 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05426Alginate_lyase

Alginate lyase

ClanCL00596_Hairpin

External Links

ECOD PDB View: 4OJZ RCSB PDB: 4OJZ PDBe: 4OJZ UniProt: Q21FJ0

Downloads

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