ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4c3oC3 - ECOD Domain | ECOD

ECOD/Domains/e4c3oC3

e4c3oC3

UID: 001142180

PDB

Range: C:54-97,C:491-543
PDB: 4C3O chain C(all domains)
UniProt: Q8ZPH0 (all domains)
Gene: STM1538

Molecule: HYDROGENASE-1 LARGE SUBUNIT

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyNiFeSe_Hases(244.4.1.2)

Ligands

in contact, ≤ 4 Å

FE4-S3 CLUSTERF4S
Magnesium ionMG
metal
formyl[bis(hydrocyanato-1kappaC)]ironnickel(Fe-Ni)NFU

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 4C3O RCSB PDB: 4C3O PDBe: 4C3O UniProt: Q8ZPH0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.