ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4hrcY1 - ECOD Domain | ECOD

ECOD/Domains/e4hrcY1

e4hrcY1

UID: 001142499

PDB

Range: Y:1-212
PDB: 4HRC chain Y(all domains)
UniProt: P30656 (all domains)
Gene: PRE2

Molecule: Proteasome component PRE2

3D Structure

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Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

N-hexanoyl-L-valyl-N~1~-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamideOV2

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

ECOD PDB View: 4HRC RCSB PDB: 4HRC PDBe: 4HRC UniProt: P30656

Downloads

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