ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1odgA1 - ECOD Domain | ECOD

ECOD/Domains/e1odgA1

e1odgA1

UID: 000114292

PDB

Range: A:23-156
PDB: 1ODG chain A(all domains)
UniProt: P09184 (all domains)
Gene: vsr

Molecule: DNA MISMATCH ENDONUCLEASE

3D Structure

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Related Domains

Browse other domains in Vsr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyVsr(2008.1.1.14)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

DNA mismatch endonuclease Vsr

ClanCL0236PDDEXK

External Links

ECOD PDB View: 1ODG RCSB PDB: 1ODG PDBe: 1ODG UniProt: P09184

Downloads

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