ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1t0fB2 - ECOD Domain | ECOD

ECOD/Domains/e1t0fB2

e1t0fB2

UID: 000114294

PDB

Range: B:7-168
PDB: 1T0F chain B(all domains)
UniProt: P13988 (all domains)
Gene: tnsA

Molecule: Transposon Tn7 transposition protein tnsA

3D Structure

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Related Domains

Browse other domains in Tn7_TnsA-like_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyTn7_TnsA-like_N(2008.1.1.30)

Ligands

in contact, ≤ 4 Å

Malonic acidMLA
drugDrugBank DB02175
Magnesium ionMG
metal

+ 1 additive ((4S)-2-METHYL-2,4-PENTANEDIOL)

Pfam Families

PF08722Tn7_TnsA-like_N

TnsA-like endonuclease N terminal

ClanCL0236PDDEXK

External Links

ECOD PDB View: 1T0F RCSB PDB: 1T0F PDBe: 1T0F UniProt: P13988

Downloads

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(4S)-2-METHYL-2,4-PENTANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.