ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mamB1 - ECOD Domain | ECOD

ECOD/Domains/e4mamB1

e4mamB1

UID: 001143023

PDB

Range: B:96-298
PDB: 4MAM chain B(all domains)
UniProt: Q5NGE8 (all domains)
Gene: purK

Molecule: Phosphoribosylaminoimidazole carboxylase, ATPase subunit

3D Structure

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Related Domains

Browse other domains in ATP-grasp →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyATP-grasp(206.1.3.7)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-methylenediphosphateA12
drugDrugBank DB03148

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462within 5 Å only

Pfam Families

PF02222ATP-grasp

ATP-grasp domain

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 4MAM RCSB PDB: 4MAM PDBe: 4MAM UniProt: Q5NGE8

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.