ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1yfiA1 - ECOD Domain | ECOD

ECOD/Domains/e1yfiA1

e1yfiA1

UID: 000114325

PDB

Range: A:1-262
PDB: 1YFI chain A(all domains)
UniProt: P11405 (all domains)
Gene: mspIR

Molecule: Type II restriction enzyme MspI

3D Structure

Loading viewer...

Related Domains

Browse other domains in Endonuc-MspI →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyEndonuc-MspI(2008.1.1.40)

Pfam Families

PF09208Endonuc-MspI

Restriction endonuclease MspI

ClanCL0236PDDEXK

External Links

ECOD PDB View: 1YFI RCSB PDB: 1YFI PDBe: 1YFI UniProt: P11405

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure