ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nakA1 - ECOD Domain | ECOD

ECOD/Domains/e4nakA1

e4nakA1

UID: 001143256

PDB

Range: A:76-298
PDB: 4NAK chain A(all domains)
UniProt: P69834 (all domains)
Gene: ISPD

Molecule: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyIspD(7516.1.1.5)

Ligands

in contact, ≤ 4 Å

1,4-DithiothreitolDTT
drugDrugBank DB04447
Cadmium ionCD
metal
Potassium ion

Pfam Families

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

ClanCL0110GT-A

External Links

ECOD PDB View: 4NAK RCSB PDB: 4NAK PDBe: 4NAK UniProt: P69834

Downloads

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metal

PentabromopseudilinPBQ

Shown in the structure viewer. Drug annotations from DrugDomain.