ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1w36E3 - ECOD Domain | ECOD

ECOD/Domains/e1w36E3

e1w36E3

UID: 000114328

PDB

Range: E:899-1174
PDB: 1W36 chain E(all domains)
UniProt: P08394 (all domains)
Gene: recB

Molecule: EXODEOXYRIBONUCLEASE V BETA CHAIN

3D Structure

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Related Domains

Browse other domains in PDDEXK_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyPDDEXK_1(2008.1.1.59)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12705PDDEXK_1

PD-(D/E)XK nuclease superfamily

ClanCL0236PDDEXK

External Links

ECOD PDB View: 1W36 RCSB PDB: 1W36 PDBe: 1W36 UniProt: P08394

Downloads

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