ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nlpA2 - ECOD Domain | ECOD

ECOD/Domains/e4nlpA2

e4nlpA2

UID: 001143360

PDB

Range: A:1-368
PDB: 4NLP chain A(all domains)
UniProt: P03300 (all domains)

Molecule: RNA-directed RNA polymerase 3D-POL

3D Structure

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Related Domains

Browse other domains in RdRP_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_1(304.48.1.8)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Acetic acid, Pentaethylene glycol)

Acetic acidACY
DrugBank DB03166
Pentaethylene glycol1PE

Pfam Families

Viral RNA-dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 4NLP RCSB PDB: 4NLP PDBe: 4NLP UniProt: P03300

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.