ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3w3oB1 - ECOD Domain | ECOD

ECOD/Domains/e3w3oB1

e3w3oB1

UID: 001143785

PDB

Range: B:0-312
PDB: 3W3O chain B(all domains)
UniProt: Q4D3W2 (all domains)
Gene: pyr4

Molecule: Dihydroorotate dehydrogenase (fumarate)

3D Structure

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Related Domains

Browse other domains in DHO_dh →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHO_dh(2002.1.1.54)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
5-[2-(6-methoxynaphthalen-2-yl)ethyl]-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acidROE

+ 1 additive (Glycerin)

Pfam Families

Dihydroorotate dehydrogenase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3W3O RCSB PDB: 3W3O PDBe: 3W3O UniProt: Q4D3W2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.