ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ci9A1 - ECOD Domain | ECOD

ECOD/Domains/e4ci9A1

e4ci9A1

UID: 001144860

PDB

Range: A:-1-259,A:300-453
PDB: 4CI9 chain A(all domains)
UniProt: P10619 (all domains)
Gene: CTSA

Molecule: LYSOSOMAL PROTECTIVE PROTEIN

3D Structure

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Related Domains

Browse other domains in Peptidase_S10 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta-Hydrolases(7579)

HH-groupalpha/beta-Hydrolases(7579.1)

TT-groupalpha/beta-Hydrolases(7579.1.1)

FFamilyPeptidase_S10(7579.1.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Acetate, Dimethyl sulfoxide, Glycerin, …)

AcetateACT
DrugBank DB14511
Dimethyl sulfoxideDMS
DrugBank DB01093
Glycerin

Pfam Families

PF00450Peptidase_S10

Serine carboxypeptidase

ClanCL0028AB_hydrolase

External Links

ECOD PDB View: 4CI9 RCSB PDB: 4CI9 PDBe: 4CI9 UniProt: P10619

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.