ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cmmB1 - ECOD Domain | ECOD

ECOD/Domains/e4cmmB1

e4cmmB1

UID: 001144864

PDB

Range: B:1-118
PDB: 4CMM chain B(all domains)
UniProt: Q08722 (all domains)
Gene: CD47

Molecule: LEUKOCYTE SURFACE ANTIGEN CD47

3D Structure

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Related Domains

Browse other domains in V-set_CD47 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set_CD47(11.1.1.107)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08204V-set_CD47

CD47 immunoglobulin-like domain

ClanCL0159E-set

External Links

ECOD PDB View: 4CMM RCSB PDB: 4CMM PDBe: 4CMM UniProt: Q08722

Downloads

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