ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kisD1 - ECOD Domain | ECOD

ECOD/Domains/e4kisD1

e4kisD1

UID: 001145762

RepresentativePDB

Range: D:133-262
PDB: 4KIS chain D(all domains)
UniProt: Q928V6 (all domains)
Gene: int

Molecule: Putative integrase [Bacteriophage A118]

3D Structure

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Related Domains

Browse other domains in Recombinase →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyRecombinase(101.1.1.40)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07508Recombinase

Recombinase

ClanCL0123HTH

External Links

ECOD PDB View: 4KIS RCSB PDB: 4KIS PDBe: 4KIS UniProt: Q928V6

Downloads

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