ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lhcB4 - ECOD Domain | ECOD

ECOD/Domains/e4lhcB4

e4lhcB4

UID: 001145915

RepresentativePDB

Range: B:795-977
PDB: 4LHC chain B(all domains)
UniProt: P74416 (all domains)
Gene: gcvP

Molecule: Glycine dehydrogenase [decarboxylating]

3D Structure

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Related Domains

Browse other domains in GcvP2_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilyGcvP2_C(3016.1.1.17)

Ligands

in contact, ≤ 4 Å

GlycineGLY
drugDrugBank DB00145

+ 3 additives (Phosphate ion, Bicarbonate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523

Pfam Families

PF21478GcvP2_C

Glycine dehydrogenase, C-terminal domain

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 4LHC RCSB PDB: 4LHC PDBe: 4LHC UniProt: P74416

Downloads

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Bicarbonate ion

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.