ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nubA2 - ECOD Domain | ECOD

ECOD/Domains/e4nubA2

e4nubA2

UID: 001145952

RepresentativePDB

Range: A:278-372
PDB: 4NUB chain A(all domains)
UniProt: P27431 (all domains)
Gene: roxA

Molecule: 50S ribosomal protein L16 arginine hydroxylase

3D Structure

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Related Domains

Browse other domains in ROXA-like_wH →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyROXA-like_wH(101.1.2.179)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF20514WHD_ROXA

ROXA-like winged helix

ClanCL0123HTH

External Links

ECOD PDB View: 4NUB RCSB PDB: 4NUB PDBe: 4NUB UniProt: P27431

Downloads

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