ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1khbA2 - ECOD Domain | ECOD

ECOD/Domains/e1khbA2

e1khbA2

UID: 000011469

RepresentativePDB

Range: A:10-259
PDB: 1KHB chain A(all domains)
UniProt: P35558 (all domains)
Gene: PCK1

Molecule: Phosphoenolpyruvate carboxykinase, cytosolic (GTP)

3D Structure

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Related Domains

Browse other domains in PEPCK_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupPEP carboxykinase N-terminal domain(2004.11)

TT-groupPEP carboxykinase N-terminal domain(2004.11.1)

FFamilyPEPCK_N(2004.11.1.2)

Ligands

in contact, ≤ 4 Å

5'-GuanylylmethylenebisphosphonateGCP
drugDrugBank DB03725within 5 Å only
MANGANESE (II) IONMN
metal

+ 2 additives (Acetate, 1,2-ETHANEDIOL)

Pfam Families

PF17297PEPCK_N

Phosphoenolpyruvate carboxykinase N-terminal domain

External Links

ECOD PDB View: 1KHB RCSB PDB: 1KHB PDBe: 1KHB UniProt: P35558

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT
DrugBank DB14511
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.