ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1eb6A1 - ECOD Domain | ECOD

ECOD/Domains/e1eb6A1

e1eb6A1

UID: 000011472

RepresentativePDB

Range: A:1-177
PDB: 1EB6 chain A(all domains)
UniProt: P46076 (all domains)
Gene: AO090010000493

Molecule: NEUTRAL PROTEASE II

3D Structure

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Related Domains

Browse other domains in Peptidase_M35 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M35(2498.1.1.20)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02102Peptidase_M35

Deuterolysin metalloprotease (M35) family

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 1EB6 RCSB PDB: 1EB6 PDBe: 1EB6 UniProt: P46076

Downloads

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