ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xv4S2 - ECOD Domain | ECOD

ECOD/Domains/e2xv4S2

e2xv4S2

UID: 001147773

RepresentativePDB

Range: S:85-237
PDB: 2XV4 chain S(all domains)
UniProt: Q9BUI4 (all domains)
Gene: POLR3C

Molecule: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC3

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpc82 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRNA_pol_Rpc82(101.1.2.73)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05645RNA_pol_Rpc82

RNA polymerase III subunit RPC82

ClanCL0123HTH

External Links

ECOD PDB View: 2XV4 RCSB PDB: 2XV4 PDBe: 2XV4 UniProt: Q9BUI4

Downloads

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