ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1c0mD2 - ECOD Domain | ECOD

ECOD/Domains/e1c0mD2

e1c0mD2

UID: 000114955

PDB

Range: D:54-198
PDB: 1C0M chain D(all domains)
UniProt: P03354 (all domains)
Gene: gag-pol

Molecule: PROTEIN (INTEGRASE)

3D Structure

Loading viewer...

Related Domains

Browse other domains in rve →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve(2484.1.1.9)

Pfam Families

Integrase core domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 1C0M RCSB PDB: 1C0M PDBe: 1C0M UniProt: P03354

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure