ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ychA4 - ECOD Domain | ECOD

ECOD/Domains/e2ychA4

e2ychA4

UID: 001149910

RepresentativePDB

Range: A:183-249,A:275-375
PDB: 2YCH chain A(all domains)
UniProt: Q72IW8 (all domains)
Gene: pilM

Molecule: COMPETENCE PROTEIN PILM

3D Structure

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Related Domains

Browse other domains in PilM_2 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPilM_2(2484.1.1.61)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Type IV pilus assembly protein PilM;

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 2YCH RCSB PDB: 2YCH PDBe: 2YCH UniProt: Q72IW8

Downloads

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