ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2yhbA6 - ECOD Domain | ECOD

ECOD/Domains/e2yhbA6

e2yhbA6

UID: 001149984

PDB

Range: A:506-648
PDB: 2YHB chain A(all domains)
UniProt: Q9P8T1 (all domains)

Molecule: POST-TRANSCRIPTIONAL GENE SILENCING PROTEIN QDE-2

3D Structure

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Related Domains

Browse other domains in Piwi →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMiddle domain in Argonaute homologs(7590)

HH-groupMiddle domain in Argonaute homologs(7590.1)

TT-groupMiddle domain in Argonaute homologs(7590.1.1)

FFamilyPiwi(7590.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Piwi domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 2YHB RCSB PDB: 2YHB PDBe: 2YHB UniProt: Q9P8T1

Downloads

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