ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vthA8 - ECOD Domain | ECOD

ECOD/Domains/e3vthA8

e3vthA8

UID: 001150074

PDB

Range: A:496-751
PDB: 3VTH chain A(all domains)
UniProt: Q8RDB0 (all domains)
Gene: HypF

Molecule: Hydrogenase maturation factor

3D Structure

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Related Domains

Browse other domains in HypF_C_2 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyHypF_C_2(2484.1.1.94)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-methylenediphosphateAP2
drugDrugBank DB03148
alpha,beta-Methyleneadenosine 5'-triphosphateAPC
drugDrugBank DB02596

Pfam Families

PF22521HypF_C_2

Carbamoyltransferase, Kae1-like Domain, second subdomain

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 3VTH RCSB PDB: 3VTH PDBe: 3VTH UniProt: Q8RDB0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

FE (III) IONFE

metal

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.