ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pmhX1 - ECOD Domain | ECOD

ECOD/Domains/e1pmhX1

e1pmhX1

UID: 000001151

RepresentativePDB

Range: X:3-185
PDB: 1PMH chain X(all domains)
UniProt: P77847 (all domains)
Gene: manA

Molecule: beta-1,4-mannanase

3D Structure

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Related Domains

Browse other domains in CBM27 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyCBM27(10.32.1.36)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Carbohydrate binding module 27

ClanCL0202GBD

External Links

ECOD PDB View: 1PMH RCSB PDB: 1PMH PDBe: 1PMH UniProt: P77847

Downloads

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