ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1o61B3 - ECOD Domain | ECOD

ECOD/Domains/e1o61B3

e1o61B3

UID: 001151923

PDB

Range: B:245-385
PDB: 1O61 chain B(all domains)
UniProt: Q9S5Y7 (all domains)
Gene: pglE

Molecule: aminotransferase

3D Structure

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Related Domains

Browse other domains in DegT_DnrJ_EryC1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilyDegT_DnrJ_EryC1(3016.1.1.6)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114within 5 Å only

+ 1 additive (Acetate ion)

Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01041DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 1O61 RCSB PDB: 1O61 PDBe: 1O61 UniProt: Q9S5Y7

Downloads

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