ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2dgmA2 - ECOD Domain | ECOD

ECOD/Domains/e2dgmA2

e2dgmA2

UID: 001151950

PDB

Range: A:3-336
PDB: 2DGM chain A(all domains)
UniProt: P69910 (all domains)
Gene: gadB

Molecule: Glutamate decarboxylase beta

3D Structure

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Related Domains

Browse other domains in Pyridoxal_deC →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyPyridoxal_deC(7577.1.1.4)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
Iodide ionIOD

+ 1 additive (Formic acid)

Formic acid

Pfam Families

PF00282Pyridoxal_deC

Pyridoxal-dependent decarboxylase conserved domain

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 2DGM RCSB PDB: 2DGM PDBe: 2DGM UniProt: P69910

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.