ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pj0A2 - ECOD Domain | ECOD

ECOD/Domains/e3pj0A2

e3pj0A2

UID: 001152214

PDB

Range: A:23-252
PDB: 3PJ0 chain A(all domains)
UniProt: Q8YA56 (all domains)
Gene: lmo0305

Molecule: Lmo0305 protein

3D Structure

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Related Domains

Browse other domains in Beta_elim_lyase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyBeta_elim_lyase(7577.1.1.8)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(4R)-2-METHYLPENTANE-2,4-DIOLMRD
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01212Beta_elim_lyase

Beta-eliminating lyase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 3PJ0 RCSB PDB: 3PJ0 PDBe: 3PJ0 UniProt: Q8YA56

Downloads

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