ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yvnA1 - ECOD Domain | ECOD

ECOD/Domains/e1yvnA1

e1yvnA1

UID: 000115396

PDB

Range: A:7-146
PDB: 1YVN chain A(all domains)
UniProt: P60010 (all domains)
Gene: ACT1

Molecule: PROTEIN (ACTIN)

3D Structure

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Related Domains

Browse other domains in Actin →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyActin(2484.1.1.2)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Sulfate ion)

Pfam Families

Actin

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 1YVN RCSB PDB: 1YVN PDBe: 1YVN UniProt: P60010

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.