ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3w68D4 - ECOD Domain | ECOD

ECOD/Domains/e3w68D4

e3w68D4

UID: 001155698

PDB

Range: D:91-275
PDB: 3W68 chain D(all domains)
UniProt: Q8BWP5 (all domains)
Gene: Ttpa

Molecule: Alpha-tocopherol transfer protein

3D Structure

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Related Domains

Browse other domains in CRAL_TRIO →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupSpoIIaa-like(2496)

HH-groupSpoIIaa-like(2496.1)

TT-groupSpoIIaa-like(2496.1.1)

FFamilyCRAL_TRIO(2496.1.1.1)

Ligands

in contact, ≤ 4 Å

Vitamin EVIV
drugDrugBank DB00163
(2R)-3-{[(R)-HYDROXY{[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIHYDROXY-4,5-BIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1,2-DIYL DIBUTANOATEPBU

+ 1 additive (Phosphate ion)

Pfam Families

PF00650CRAL_TRIO

CRAL/TRIO domain

ClanCL0512CRAL_TRIO

External Links

ECOD PDB View: 3W68 RCSB PDB: 3W68 PDBe: 3W68 UniProt: Q8BWP5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.