ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4j42B2 - ECOD Domain | ECOD

ECOD/Domains/e4j42B2

e4j42B2

UID: 001156562

PDB

Range: B:5-89
PDB: 4J42 chain B(all domains)
UniProt: Q81R67 (all domains)

Molecule: secreted protein EsxB

3D Structure

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Related Domains

Browse other domains in WXG100 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFerritin/Heme oxygenase/4-helical cytokines(150)

HH-groupESAT-6 like(150.5)

TT-groupESAT-6 like(150.5.1)

FFamilyWXG100(150.5.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Formic acid, Citrate anion)

Formic acidFMT
DrugBank DB01942
Citrate anionFLC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Proteins of 100 residues with WXG

ClanCL0352EsxAB

External Links

ECOD PDB View: 4J42 RCSB PDB: 4J42 PDBe: 4J42 UniProt: Q81R67

Downloads

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