ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4iglC4 - ECOD Domain | ECOD

ECOD/Domains/e4iglC4

e4iglC4

UID: 001156978

PDB

Range: C:7-380,C:682-1484
PDB: 4IGL chain C(all domains)
UniProt: B6A880 (all domains)
Gene: yenB

Molecule: YenB

3D Structure

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Related Domains

Browse other domains in SpvB,TcdB_toxin_midC,TcdB_toxin_midN →

Classification

AArchitecturebeta meanders(a.2)

XX-groupRearrangement hotspot (RHS) repeats protein(3735)

HH-groupRearrangement hotspot (RHS) repeats protein(3735.1)

TT-groupRearrangement hotspot (RHS) repeats protein(3735.1.1)

FFamilySpvB,TcdB_toxin_midC,TcdB_toxin_midN(3735.1.1.2)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Salmonella virulence plasmid 65kDa B protein

PF12255TcdB_toxin_midC

Insecticide toxin TcdB middle/C-terminal region

ClanCL0877RHS_sf

PF12256TcdB_toxin_midN

Insecticide toxin TcdB middle/N-terminal region

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 4IGL RCSB PDB: 4IGL PDBe: 4IGL UniProt: B6A880

Downloads

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