ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3aygA2 - ECOD Domain | ECOD

ECOD/Domains/e3aygA2

e3aygA2

UID: 001157394

PDB

Range: A:239-777
PDB: 3AYG chain A(all domains)
UniProt: B3Y963 (all domains)
Gene: norZ

Molecule: Nitric oxide reductase

3D Structure

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Related Domains

Browse other domains in COX1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupCytochrome c oxidase subunit I-like(5038)

HH-groupCytochrome c oxidase subunit I-like(5038.1)

TT-groupCytochrome c oxidase subunit I-like(5038.1.1)

FFamilyCOX1(5038.1.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
2-heptyl-4-hydroxyquinoline N-oxideHQO
drugDrugBank DB07918

Pfam Families

Cytochrome C and Quinol oxidase polypeptide I

ClanCL0714COX1-like

External Links

ECOD PDB View: 3AYG RCSB PDB: 3AYG PDBe: 3AYG UniProt: B3Y963

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Calcium ion

metal

(1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATELOP

Zinc ionZN

metal

+ 1 additive (octyl beta-D-glucopyranoside)

octyl beta-D-glucopyranosideBOG

Shown in the structure viewer. Drug annotations from DrugDomain.