ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2y8kA4 - ECOD Domain | ECOD

ECOD/Domains/e2y8kA4

e2y8kA4

UID: 001158423

PDB

Range: A:362-516
PDB: 2Y8K chain A(all domains)
UniProt: A3DHG6 (all domains)
Gene: Cthe_2193

Molecule: CARBOHYDRATE BINDING FAMILY 6

3D Structure

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Related Domains

Browse other domains in CBM_6 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyCBM_6(10.32.1.12)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Sodium ionNA
metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Carbohydrate binding module (family 6)

ClanCL0202GBD

External Links

ECOD PDB View: 2Y8K RCSB PDB: 2Y8K PDBe: 2Y8K UniProt: A3DHG6

Downloads

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