ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4duvD16 - ECOD Domain | ECOD

ECOD/Domains/e4duvD16

e4duvD16

UID: 001158487

PDB

Range: D:731-1023
PDB: 4DUV chain D(all domains)
UniProt: P00722 (all domains)
Gene: lacZ

Molecule: Beta-galactosidase

3D Structure

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Related Domains

Browse other domains in Bgal_small_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupsupersandwich(12.3)

TT-groupsupersandwich(12.3.1)

FFamilyBgal_small_N(12.3.1.6)

Ligands

in contact, ≤ 4 Å

2-Deoxy-alpha-D-galactopyranose2DG
drugDrugBank DB04382within 5 Å only
Sodium ionNA
metal

+ 2 additives (2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Dimethyl sulfoxide)

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL

Pfam Families

PF02929Bgal_small_N

Beta galactosidase small chain

ClanCL0103Gal_mutarotase

External Links

ECOD PDB View: 4DUV RCSB PDB: 4DUV PDBe: 4DUV UniProt: P00722

Downloads

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Dimethyl sulfoxideDMS

Shown in the structure viewer. Drug annotations from DrugDomain.