ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4duvD17 - ECOD Domain | ECOD

ECOD/Domains/e4duvD17

e4duvD17

UID: 001158488

PDB

Range: D:9-219
PDB: 4DUV chain D(all domains)
UniProt: P00722 (all domains)
Gene: lacZ

Molecule: Beta-galactosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyGlyco_hydro_2_N(10.32.1.9)

Ligands

in contact, ≤ 4 Å

2-Deoxy-alpha-D-galactopyranose2DG
drugDrugBank DB04382
Magnesium ionMG
metal
Sodium ion

Pfam Families

PF02837Glyco_hydro_2_N

Glycosyl hydrolases family 2, sugar binding domain

ClanCL0202GBD

External Links

ECOD PDB View: 4DUV RCSB PDB: 4DUV PDBe: 4DUV UniProt: P00722

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 2 additives (2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Dimethyl sulfoxide)

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLBTB
Dimethyl sulfoxideDMS

Shown in the structure viewer. Drug annotations from DrugDomain.