ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vrbF6 - ECOD Domain | ECOD

ECOD/Domains/e3vrbF6

e3vrbF6

UID: 001159252

PDB

Range: F:33-138
PDB: 3VRB chain F(all domains)
UniProt: O44074 (all domains)
Gene: SDHB

Molecule: Iron-sulfur subunit of succinate dehydrogenase

3D Structure

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Related Domains

Browse other domains in Fer2_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyFer2_3(221.1.1.47)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147within 5 Å only
FE2/S2 (INORGANIC) CLUSTERFES

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

2Fe-2S iron-sulfur cluster binding domain

ClanCL0486Fer2

External Links

ECOD PDB View: 3VRB RCSB PDB: 3VRB PDBe: 3VRB UniProt: O44074

Downloads

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