ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bj5E4 - ECOD Domain | ECOD

ECOD/Domains/e4bj5E4

e4bj5E4

UID: 001159495

PDB

Range: E:675-783
PDB: 4BJ5 chain E(all domains)
UniProt: P11938 (all domains)
Gene: RAP1

Molecule: DNA-BINDING PROTEIN RAP1

3D Structure

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Related Domains

Browse other domains in Rap1_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRepressor activator protein 1 (RAP1) helical bundle domain(3764)

HH-groupRepressor activator protein 1 (RAP1) helical bundle domain(3764.1)

TT-groupRepressor activator protein 1 (RAP1) helical bundle domain(3764.1.1)

FFamilyRap1_C(3764.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

TRF2-interacting telomeric protein/Rap1 - C terminal domain

External Links

ECOD PDB View: 4BJ5 RCSB PDB: 4BJ5 PDBe: 4BJ5 UniProt: P11938

Downloads

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