ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4b4cA5 - ECOD Domain | ECOD

ECOD/Domains/e4b4cA5

e4b4cA5

UID: 001159966

RepresentativePDB

Range: A:1211-1327
PDB: 4B4C chain A(all domains)
UniProt: O14646 (all domains)
Gene: CHD1

Molecule: CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1

3D Structure

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Related Domains

Browse other domains in HTH_Hrp3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyHTH_Hrp3(101.1.1.222)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Sulfate ion, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

PF23588HTH_CHD1_Hrp3

ATP-dependent helicase CHD1-2/hrp3 HTH domain

ClanCL0123HTH

External Links

ECOD PDB View: 4B4C RCSB PDB: 4B4C PDBe: 4B4C UniProt: O14646

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.